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-    Publications 2010 
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-<​bibtex>​ 
-@inproceedings{Commowick_Miccai_2010,​ 
- Author = {Olivier Commowick and Simon K. Warfield}, 
- Booktitle = {Proceedings of the 13th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'​10)},​ 
- Month = sep, 
- Note = {To appear.}, 
-        Publisher = {Springer}, 
- Series = {LNCS}, 
- Title = {Incorporating Priors On Expert Performance Parameters for Segmentation Validation and Label Fusion: a Maximum A Posteriori STAPLE}, 
- Year = {2010} 
-} 
- 
-@inproceedings{Garcia_EMPIRE_2010,​ 
- Author = {Vincent Garcia and Olivier Commowick and Gr{\'​e}goire Malandain}, 
- Booktitle = {Proceedings of A Grand Challenge on Pulmonary Image Registration (EMPIRE'​10),​ held in conjunction with MICCAI'​10},​ 
- Month = sep, 
- Note = {To appear.}, 
- Title = {A Robust and Efficient Block Matching Framework for Non Linear Registration of Thoracic CT Images}, 
- Year = {2010} 
-} 
- 
-@inproceedings{Ramus_Miccai_2010,​ 
- Author = {Liliane Ramus and Olivier Commowick and Gr\'​egoire Malandain}, 
- Booktitle = {Medical Image Computing and Computer-Assisted Intervention (MICCAI'​10)},​ 
- Month = sep, 
- Note = {To appear}, 
-        Publisher = {Springer}, 
- Series = {LNCS}, 
- Title = {Construction of Patient Specific Atlases from Locally Most Similar Anatomical Pieces}, 
- Year = {2010} 
-} 
- 
-@InProceedings{Combes10c,​ 
-   ​Author = {Combès, Benoît and Prima, Sylvain}, 
-   Title = {An efficient EM-ICP algorithm for symmetric consistent non-linear registration of point sets}, 
-   ​BookTitle = {13th International Conference on Medical Image Computing and Computer-Assisted Intervention,​ MICCAI'​2010},​ 
-   ​editor = {Jiang, Tianzi and Colchester, A. and Duncan, J.}, 
-   ​Series = {Lecture Notes in Computer Science}, 
-   ​Publisher = {Springer}, 
-   ​Address = {Beijing, China}, 
-   Month = {September},​ 
-   Year = {2010} 
- 
- 
-@InProceedings{Combes10b,​ 
-   ​Author = {Combès, Benoît and Braga, José and Thackeray, Francis and Prima, Sylvain}, 
-   Title = {{3D automated quantification of asymmetries on fossil endocasts}},​ 
-   ​BookTitle = {79th Annual Meeting of the American Association of Physical Anthropologists (AAPA)}, 
-   ​Address = {Albuquerque,​ USA}, 
-   Month = {April}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Lalys10b,​ 
-   ​Author = {Lalys, F. and Riffaud, L. and Morandi, X. and Jannin, P.}, 
-   Title = {Automatic phases recognition in pituitary surgeries by microscope images classification},​ 
-   ​BookTitle = {1st International Conference on Information Processing in Computer-Assisted Interventions,​ IPCAI'​2010},​ 
-   ​Address = {Geneva, Switzerland},​ 
-   Month = {June}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Lalys10a,​ 
-   ​Author = {Lalys, F. and Haegelen, C. and Baillieul, M. and Abadie, A. and Jannin, P.}, 
-   Title = {Anatomo-clinical atlases in subthalamic Deep Brain Stimulation correlating clinical data and electrode contacts coordinates},​ 
-   ​BookTitle = {7th Annual World Congress for Brain Mapping and Image Guided Therapy, IBMISPS'​2010},​ 
-   ​Address = {Washington DC, USA}, 
-   Month = {May}, 
-   Year = {2010} 
- 
- 
- 
- 
-@InProceedings{LeGuen10a,​ 
-   ​Author = {Le Guen, Arnaud and Gauvrit, Jean-Yves and Petr, Jan and Barillot, Christian and Ferré, Jean-Christophe},​ 
-   Title = {Optimization and reproducibility of brain arterial spin labeling sequence at 3 Tesla}, 
-   ​BookTitle = {Proceedings of European Congress of Radiology (ECR 2010)}, 
-   ​Address = {Vienna, Austria}, 
-   Month = {March}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Lecoeur10a,​ 
-   ​Author = {Lecoeur, J. and Ferré, J.-C. and Barillot, C.}, 
-   Title = {Segmentation multimodale optimale par coupe de graphe multispectral : applications aux lésions de sclérose en plaques en IRM}, 
-   ​BookTitle = {Actes de la 17ème conférence en Reconnaissance des Formes et Intelligence Artificielle (RFIA 2010)}, 
-   ​Address = {Caen, France}, 
-   Month = {January}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Mani-K-B:​ISBI2010,​ 
-   ​Author = {Mani, Meena and Kurtek, Sebastian and Barillot, Christian and Srivastava, Anuj}, 
-   Title = {A Comprehensive Riemannian Framework for the Analysis of White Matter Fiber Tracts}, 
-   ​BookTitle = {7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'​2010},​ 
-   Pages = {1101--1104},​ 
-   ​Publisher = {IEEE}, 
-   ​Address = {Rotterdam},​ 
-   Month = {April}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Munch,​ 
-   ​Author = {Münch, Daniel and Combès, Benoît and Prima, Sylvain}, 
-   Title = {A modified ICP algorithm for normal-guided surface registration},​ 
-   ​BookTitle = {Proceedings of SPIE Medical Imaging 2010: Image Processing},​ 
-   ​editor = {Dawant, Benoit M. and Haynor, David R.}, 
-   ​Address = {San Diego, USA}, 
-   Month = {February}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Petr10a,​ 
-   ​Author = {Petr, Jan and Ferré, Jean-Christophe and Gauvrit, Jean-Yves and Barillot, Christian}, 
-   Title = {Improving arterial spin labeling by temporal filtering}, 
-   ​BookTitle = {Proceedings of SPIE Medical Imaging 2010: Image Processing},​ 
-   ​editor = {Dawant, Benoit M. and Haynor, David R.}, 
-   ​Address = {San Diego, USA}, 
-   Month = {February}, 
-   Year = {2010} 
- 
- 
-@InProceedings{Petr10b,​ 
-   ​Author = {Petr, Jan and Ferré, Jean-Christophe and Gauvrit, Jean-Yves and Barillot, Christian}, 
-   Title = {Denoising arterial spin labeling MRI using tissue partial volume}, 
-   ​BookTitle = {Proceedings of SPIE Medical Imaging 2010: Image Processing},​ 
-   ​editor = {Dawant, Benoit M. and Haynor, David R.}, 
-   ​Address = {San Diego, USA}, 
-   Month = {February}, 
-   Year = {2010} 
- 
- 
-@article{Hellier10a,​ 
-   ​Author = {Hellier, P. and Coupé, P. and Morandi, X. and Collins, D. L.}, 
-   Title = {An automatic geometrical and statistical method to detect acoustic shadows in intraoperative ultrasound brain images}, 
-   ​Journal = {Medical Image Analysis}, 
-   Year = {2010} 
- 
- 
-@article{Guibert10a,​ 
-   ​Author = {de Guibert, C. and Maumet, C. and Ferré, J.-C. and Jannin, P. and Biraben, A. and Allaire, C. and Barillot, C. and Le Rumeur, E.}, 
-   Title = {FMRI language mapping in children: A panel of language tasks using visual and auditory stimulation without reading or metalinguistic requirements},​ 
-   ​Journal = {NeuroImage},​ 
-   ​Volume = {51}, 
-   ​Number = {2}, 
-   Pages = {897--909}, 
-   Month = {February}, 
-   Year = {2010} 
- 
-@article{ 
-   ​Author = {Neumuth, Thomas and Jannin, Pierre and Schlomberg, Juliane and Meixensberger,​ Jürgen and Wiedemann, Peter and Burgert, Oliver}, 
-   Title = {Analysis of surgical intervention populations using generic surgical process models}, 
-   ​Journal = {International Journal of Computer Assisted Radiology and Surgery}, 
-   Note = {10.1007/​s11548-010-0475-y},​ 
-   ​Abstract = {Abstract Purpose&​nbsp;&​nbsp;​According to differences in patient characteristics,​ surgical performance,​ or used surgical technological resources, surgical interventions have high variability. No methods for the generation and comparison of statistical ‘mean’ surgical procedures are available. The convenience of these models is to provide increased evidence for clinical, technical, and administrative decision-making. Methods&​nbsp;&​nbsp;​Based on several measurements of patient individual surgical treatments, we present a method of how to calculate a statistical ‘mean’ intervention model, called generic Surgical Process Model (gSPM), from a number of interventions. In a proof-of-concept study, we show how statistical ‘mean’ procedure courses can be computed and how differences between several of these models can be quantified. Patient individual surgical treatments of 102 cataract interventions from eye surgery were allocated to an ambulatory or inpatient sample, and the gSPMs for each of the samples were computed. Both treatment strategies are exemplary compared for the interventional phase Capsulorhexis. Results&​nbsp;&​nbsp;​Statistical differences between the gSPMs of ambulatory and inpatient procedures of performance times for surgical activities and activity sequences were identified. Furthermore,​ the work flow that corresponds to the general recommended clinical treatment was recovered out of the individual Surgical Process Models. Conclusion&​nbsp;&​nbsp;​The computation of gSPMs is a new approach in medical engineering and medical informatics. It supports increased evidence, e.g. for the application of alternative surgical strategies, investments for surgical technology, optimization protocols, or surgical education. Furthermore,​ this may be applicable in more technical research fields, as well, such as the development of surgical workflow management systems for the operating room of the future.}, 
-      Year = {2010} } 
- 
- 
- 
-@article{ 
-   ​Author = {Lalys, F. and Haegelen, C. and Ferre, J.C. and El-Ganaoui, O. and Jannin, P.}, 
-   Title = {Construction and assessment of a 3T MRI brain template}, 
-   ​Journal = {Neuroimage},​ 
-   ​Volume = {49}, 
-   ​Number = {1}, 
-   Pages = {345-354}, 
-      Year = {2010} } 
- 
- 
- 
-@article{ 
-   ​Author = {Duhameau, B. and Ferre, J. C. and Jannin, P. and Gauvrit, J. Y. and Verin, M. and Millet, B. and Drapier, D.}, 
-   Title = {Chronic and treatment-resistant depression: A study using arterial spin labeling perfusion MRI at 3Tesla}, 
-   ​Journal = {Psychiatry Res}, 
-   Note = {Journal article 
-Psychiatry research 
-Psychiatry Res. 2010 Apr 26.}, 
-   ​Abstract = {The aim of the present study was to compare patients displaying chronic and treatment-resistant depression with healthy controls, using the resting-state perfusion with arterial spin labeling (ASL) perfusion magnetic resonance imaging (MRI) technique at 3T. The study focused on the subgenual anterior cingulate cortex (sACC), which is a key component in the pathophysiology of depression. Six patients with chronic and treatment-resistant depression and six healthy control subjects were included. ASL is an innovative imaging technique which sidesteps the limitations of other functional neuroimaging techniques (functional MRI, positron emission tomography). A statistical analysis of perfusion maps was performed using SPM2 software. Statistically significant hyperperfusion regions were found in the depressed patient group compared with the healthy control group in the following: the bilateral sACC, left prefrontal dorsomedian cortex, left ACC and left subcortical areas (putamen, pallidum and amygdala). This study confirmed the involvement of the sACC in depression, particularly chronic and treatment-resistant depression, using ASL at 3T, a safe perfusion technique that seems to be appropriate for investigating functional abnormalities in psychiatric disorders.},​ 
-      Year = {2010} } 
- 
-</​bibtex>​ 
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